Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_104284 | Not Available | Positive | 2224752 - 2225066 | 10687.7 |
| hypothetical protein | SAMN06295900_104285 | Not Available | Positive | 2225129 - 2225329 | 7077.64 |
| hypothetical protein | SAMN06295900_104286 | Not Available | Positive | 2225352 - 2225762 | 13748.5 |
| type iii secretion protein j | SAMN06295900_104287 | Not Available | Positive | 2225773 - 2226558 | 27913.9 |
| hypothetical protein | SAMN06295900_104288 | Not Available | Positive | 2226548 - 2227222 | 25229.3 |
| hypothetical protein | SAMN06295900_104289 | Not Available | Positive | 2227219 - 2227821 | 22222.4 |
| two-component system, narl family, captular synthesis response regulator rcsb | SAMN06295900_104290 | Not Available | Positive | 2228088 - 2228744 | 23641.9 |
| multi-sensor hybrid histidine kinase | SAMN06295900_104291 | Not Available | Positive | 2228741 - 2231641 | 104834.0 |
| acid phosphatase | SAMN06295900_104292 | Not Available | Negative | 2231654 - 2233240 | 57355.3 |
| cytochrome c peroxidase | SAMN06295900_104293 | Not Available | Positive | 2233353 - 2234726 | 48990.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.