Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase (cytochrome) | SAMN06295900_101190 | Not Available | Negative | 204358 - 205779 | 50901.8 |
| atp:cob(i)alamin adenosyltransferase | SAMN06295900_101191 | Not Available | Positive | 205990 - 206541 | 19748.7 |
| nitric oxide dioxygenase | SAMN06295900_101192 | Not Available | Positive | 206680 - 207882 | 43492.8 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN06295900_101193 | Not Available | Negative | 208045 - 209118 | 38498.0 |
| microcin-processing peptidase 2. unknown type peptidase. merops family u62 | SAMN06295900_101194 | Not Available | Negative | 209473 - 210939 | 51397.5 |
| nitrilase | SAMN06295900_101195 | Not Available | Negative | 211078 - 211869 | 29004.5 |
| tigr02099 family protein | SAMN06295900_101196 | Not Available | Negative | 211965 - 216158 | 149156.0 |
| glutamate-ammonia-ligase adenylyltransferase | SAMN06295900_101197 | Not Available | Positive | 216334 - 219135 | 103593.0 |
| dna replication and repair protein recn | SAMN06295900_101198 | Not Available | Negative | 219167 - 220837 | 59471.0 |
| nad+ kinase | SAMN06295900_101199 | Not Available | Negative | 220909 - 221829 | 33199.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.