Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06295900_104232 | Not Available | Positive | 2181473 - 2182267 | 26674.3 |
| predicted arabinose efflux permease, mfs family | SAMN06295900_104233 | Not Available | Negative | 2182387 - 2183571 | 40554.3 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN06295900_104234 | Not Available | Negative | 2183580 - 2184407 | 29979.0 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN06295900_104235 | Not Available | Negative | 2184451 - 2185494 | 37398.6 |
| putative spermidine/putrescine transport system permease protein | SAMN06295900_104236 | Not Available | Negative | 2185518 - 2186396 | 31233.9 |
| putative spermidine/putrescine transport system permease protein | SAMN06295900_104237 | Not Available | Negative | 2186404 - 2187228 | 28667.8 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN06295900_104238 | Not Available | Negative | 2187347 - 2188414 | 38685.1 |
| transcriptional regulator, laci family | SAMN06295900_104239 | Not Available | Negative | 2188509 - 2189552 | 37662.7 |
| undecaprenyl-diphosphatase | SAMN06295900_104240 | Not Available | Positive | 2189799 - 2190629 | 29945.5 |
| Trna-arg | Not Available | Not Available | Positive | 2190725 - 2190799 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.