Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_104221 | Not Available | Positive | 2161481 - 2162125 | 22419.7 |
| uncharacterized membrane protein yccc | SAMN06295900_104222 | Not Available | Negative | 2162568 - 2164841 | 84072.8 |
| dna helicase/exodeoxyribonuclease v, gamma subunit | SAMN06295900_104223 | Not Available | Positive | 2165019 - 2168441 | 123176.0 |
| dna helicase/exodeoxyribonuclease v, beta subunit | SAMN06295900_104224 | Not Available | Positive | 2168438 - 2172217 | 136784.0 |
| exodeoxyribonuclease v alpha subunit | SAMN06295900_104225 | Not Available | Positive | 2172290 - 2174401 | 73001.9 |
| ribosome-associated protein | SAMN06295900_104226 | Not Available | Positive | 2174491 - 2174895 | 14894.1 |
| diguanylate phosphodiesterase | SAMN06295900_104227 | Not Available | Negative | 2174929 - 2176356 | 52211.4 |
| eama domain-containing membrane protein rard | SAMN06295900_104228 | Not Available | Negative | 2176537 - 2177466 | 32061.0 |
| hydroxymethylpyrimidine synthase | SAMN06295900_104229 | Not Available | Negative | 2177757 - 2179688 | 71345.0 |
| eama-like transporter family protein | SAMN06295900_104231 | Not Available | Positive | 2180258 - 2181151 | 30551.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.