Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_104191 | Not Available | Negative | 2124500 - 2125183 | 23700.2 |
| hypothetical protein | SAMN06295900_104192 | Not Available | Positive | 2125444 - 2125695 | 9220.24 |
| phosphoenolpyruvate synthase | SAMN06295900_104193 | Not Available | Negative | 2125759 - 2128194 | 88199.9 |
| hypothetical protein | SAMN06295900_104194 | Not Available | Negative | 2128219 - 2128692 | 16978.1 |
| transcriptional regulator, lysr family | SAMN06295900_104195 | Not Available | Negative | 2128809 - 2129654 | 30010.3 |
| fmn-dependent nadh-azoreductase | SAMN06295900_104196 | Not Available | Positive | 2129760 - 2130398 | 23126.5 |
| hypothetical protein | SAMN06295900_104197 | Not Available | Negative | 2130516 - 2130656 | 5134.32 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN06295900_104198 | Not Available | Positive | 2130699 - 2131490 | 27959.6 |
| c-di-gmp-related signal transduction protein, contains eal and hdod domains | SAMN06295900_104199 | Not Available | Positive | 2131714 - 2133051 | 47723.2 |
| hypothetical protein | SAMN06295900_104200 | Not Available | Negative | 2133084 - 2134094 | 38280.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.