Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN06295900_104181 | Not Available | Positive | 2112383 - 2113528 | 41528.8 |
| succinylornithine aminotransferase apoenzyme | SAMN06295900_104182 | Not Available | Positive | 2113604 - 2114821 | 43286.0 |
| arginine succinyltransferase | SAMN06295900_104183 | Not Available | Positive | 2114862 - 2116025 | 42110.9 |
| arginine succinyltransferase | SAMN06295900_104184 | Not Available | Positive | 2116022 - 2117059 | 37855.1 |
| succinylglutamic semialdehyde dehydrogenase | SAMN06295900_104185 | Not Available | Positive | 2117056 - 2118663 | 56893.4 |
| succinylarginine dihydrolase | SAMN06295900_104186 | Not Available | Positive | 2118694 - 2120034 | 48572.2 |
| succinylglutamate desuccinylase | SAMN06295900_104187 | Not Available | Positive | 2120018 - 2121097 | 37829.0 |
| glutathione s-transferase | SAMN06295900_104188 | Not Available | Negative | 2121110 - 2121727 | 22930.7 |
| heat shock protein hsp20 | SAMN06295900_104189 | Not Available | Positive | 2122026 - 2122463 | 15979.9 |
| ribonucleoside-diphosphate reductase class ii | SAMN06295900_104190 | Not Available | Negative | 2122561 - 2124390 | 64753.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.