Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized copper-binding protein, cupredoxin-like subfamily | SAMN06295900_104171 | Not Available | Negative | 2102460 - 2102936 | 16987.2 |
| hypothetical protein | SAMN06295900_104172 | Not Available | Negative | 2103098 - 2103448 | 11574.9 |
| pyridoxal kinase | SAMN06295900_104173 | Not Available | Negative | 2103511 - 2104365 | 30972.0 |
| ceramide glucosyltransferase | SAMN06295900_104174 | Not Available | Positive | 2104824 - 2106056 | 43734.1 |
| hopanoid biosynthesis associated radical sam protein hpnj | SAMN06295900_104175 | Not Available | Positive | 2106112 - 2107533 | 53831.5 |
| hopanoid biosynthesis associated protein hpnk | SAMN06295900_104176 | Not Available | Positive | 2107539 - 2108408 | 30500.9 |
| putative membrane protein | SAMN06295900_104177 | Not Available | Positive | 2108405 - 2109457 | 37574.8 |
| amino acid abc transporter membrane protein 1, paat family | SAMN06295900_104178 | Not Available | Positive | 2110104 - 2110826 | 25907.2 |
| amino acid abc transporter membrane protein 2, paat family | SAMN06295900_104179 | Not Available | Positive | 2110823 - 2111536 | 26333.5 |
| amino acid abc transporter atp-binding protein, paat family | SAMN06295900_104180 | Not Available | Positive | 2111555 - 2112349 | 29447.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.