Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN06295900_104161 | Not Available | Positive | 2091236 - 2092129 | 32063.1 |
| transglutaminase-like superfamily protein | SAMN06295900_104162 | Not Available | Positive | 2092136 - 2094100 | 71157.4 |
| predicted transcriptional regulator yheo, contains pas and dna-binding hth domains | SAMN06295900_104163 | Not Available | Positive | 2094131 - 2094769 | 22695.2 |
| l-threonine ammonia-lyase | SAMN06295900_104164 | Not Available | Positive | 2094810 - 2095772 | 34211.9 |
| hypothetical protein | SAMN06295900_104165 | Not Available | Negative | 2095789 - 2096610 | 28147.8 |
| putative membrane protein | SAMN06295900_104166 | Not Available | Negative | 2096708 - 2097571 | 32111.2 |
| high-affinity nickel-transport protein | SAMN06295900_104167 | Not Available | Negative | 2097649 - 2098746 | 38758.6 |
| aspartate/methionine/tyrosine aminotransferase | SAMN06295900_104168 | Not Available | Negative | 2098858 - 2100015 | 41357.9 |
| transcriptional regulator, gntr family | SAMN06295900_104169 | Not Available | Positive | 2100051 - 2100761 | 26180.2 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN06295900_104170 | Not Available | Negative | 2100820 - 2101968 | 40193.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.