Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | SAMN06295900_104151 | Not Available | Positive | 2081237 - 2082928 | 61668.6 |
| hypothetical protein | SAMN06295900_104152 | Not Available | Positive | 2082925 - 2083569 | 22236.6 |
| imidazolonepropionase | SAMN06295900_104153 | Not Available | Positive | 2083697 - 2084950 | 44814.7 |
| formimidoylglutamate deiminase | SAMN06295900_104154 | Not Available | Positive | 2084947 - 2086341 | 49898.1 |
| n-formylglutamate deformylase | SAMN06295900_104155 | Not Available | Positive | 2086432 - 2087253 | 30018.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_104156 | Not Available | Positive | 2087381 - 2088220 | 30058.9 |
| transcriptional regulator, lysr family | SAMN06295900_104157 | Not Available | Negative | 2088311 - 2089279 | 35165.4 |
| hypothetical protein | SAMN06295900_104158 | Not Available | Negative | 2089440 - 2089763 | 11268.5 |
| addiction module antidote protein, higa family | SAMN06295900_104159 | Not Available | Positive | 2090194 - 2090499 | 11186.6 |
| hypothetical protein | SAMN06295900_104160 | Not Available | Negative | 2090536 - 2091084 | 20682.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.