Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-methionine transport system permease protein | SAMN06295900_104131 | Not Available | Positive | 2056797 - 2057450 | 23060.1 |
| electron transfer flavoprotein beta subunit | SAMN06295900_104132 | Not Available | Positive | 2057661 - 2058410 | 26558.6 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN06295900_104133 | Not Available | Positive | 2058427 - 2059362 | 31579.7 |
| acyl-coa dehydrogenase | SAMN06295900_104134 | Not Available | Positive | 2059454 - 2061244 | 63377.7 |
| d-amino acid dehydrogenase small subunit | SAMN06295900_104135 | Not Available | Negative | 2061390 - 2062676 | 46108.5 |
| transcriptional regulator, asnc family | SAMN06295900_104136 | Not Available | Positive | 2062775 - 2063263 | 18565.8 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN06295900_104137 | Not Available | Positive | 2063393 - 2064469 | 37856.2 |
| acyl-coa dehydrogenase | SAMN06295900_104138 | Not Available | Negative | 2064463 - 2065629 | 41084.0 |
| hypothetical protein | SAMN06295900_104139 | Not Available | Negative | 2065683 - 2066891 | 44813.4 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN06295900_104140 | Not Available | Negative | 2066952 - 2069078 | 75255.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.