Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udpglucose 6-dehydrogenase | SAMN06295900_104121 | Not Available | Positive | 2046249 - 2047646 | 50932.6 |
| d-alpha,beta-d-heptose 7-phosphate 1-kinase | SAMN06295900_104122 | Not Available | Positive | 2047633 - 2048640 | 35896.1 |
| adp-glyceromanno-heptose 6-epimerase precursor | SAMN06295900_104123 | Not Available | Positive | 2048705 - 2049697 | 37064.8 |
| competence protein comea | SAMN06295900_104124 | Not Available | Positive | 2049780 - 2050127 | 11931.5 |
| cysteine synthase | SAMN06295900_104125 | Not Available | Positive | 2050440 - 2051342 | 32673.3 |
| membrane-bound lytic murein transglycosylase b | SAMN06295900_104126 | Not Available | Negative | 2051363 - 2052727 | 49309.6 |
| acetoin utilization deacetylase acuc | SAMN06295900_104127 | Not Available | Positive | 2052814 - 2053737 | 33908.3 |
| enoyl-coa hydratase/carnithine racemase | SAMN06295900_104128 | Not Available | Positive | 2053784 - 2054611 | 29044.3 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN06295900_104129 | Not Available | Negative | 2054637 - 2055533 | 31792.4 |
| d-methionine transport system atp-binding protein | SAMN06295900_104130 | Not Available | Positive | 2055728 - 2056804 | 38716.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.