Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis sensory transducer | SAMN06295900_104101 | Not Available | Positive | 2025799 - 2026515 | 25965.9 |
| hypothetical protein | SAMN06295900_104102 | Not Available | Positive | 2026512 - 2027051 | 19614.5 |
| chemotaxis phosphatase chex | SAMN06295900_104103 | Not Available | Positive | 2027113 - 2028075 | 35273.4 |
| response regulator receiver protein | SAMN06295900_104104 | Not Available | Positive | 2028108 - 2028473 | 12897.8 |
| Tmrna,resume consensus sequence (at 84): agtaactgcgaacgacaa | Not Available | Not Available | Positive | 2028583 - 2028940 | Not Available |
| phosphoglycolate phosphatase | SAMN06295900_104106 | Not Available | Negative | 2029051 - 2029764 | 25100.1 |
| 3-demethylubiquinone-9 3-methyltransferase | SAMN06295900_104107 | Not Available | Negative | 2029810 - 2030508 | 25277.3 |
| ompa-ompf porin, oop family | SAMN06295900_104108 | Not Available | Negative | 2030781 - 2031452 | 23798.3 |
| dna gyrase subunit a | SAMN06295900_104109 | Not Available | Positive | 2031982 - 2034600 | 96688.0 |
| hypothetical protein | SAMN06295900_104110 | Not Available | Positive | 2034728 - 2035339 | 22020.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.