Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_10491 | Not Available | Positive | 2013248 - 2013514 | 9340.27 |
| pretoxin hint domain-containing protein | SAMN06295900_10492 | Not Available | Positive | 2014235 - 2016004 | 63502.6 |
| hypothetical protein | SAMN06295900_10493 | Not Available | Positive | 2016165 - 2016437 | 9767.22 |
| hypothetical protein | SAMN06295900_10494 | Not Available | Positive | 2016504 - 2016812 | 10856.8 |
| hypothetical protein | SAMN06295900_10495 | Not Available | Positive | 2017043 - 2018527 | 52027.4 |
| hypothetical protein | SAMN06295900_10496 | Not Available | Positive | 2018738 - 2020153 | 49955.3 |
| hypothetical protein | SAMN06295900_10497 | Not Available | Positive | 2020203 - 2020343 | 5257.49 |
| kelch motif-containing protein | SAMN06295900_10498 | Not Available | Positive | 2020469 - 2022469 | 67779.1 |
| hypothetical protein | SAMN06295900_10499 | Not Available | Negative | 2022589 - 2022954 | 12346.8 |
| two-component system, chemotaxis family, sensor kinase chea | SAMN06295900_104100 | Not Available | Positive | 2023302 - 2025746 | 89106.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.