Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit c | SAMN06295900_10481 | Not Available | Positive | 1998261 - 2000387 | 77482.7 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN06295900_10482 | Not Available | Positive | 2000527 - 2001123 | 21989.6 |
| metabolite-proton symporter | SAMN06295900_10483 | Not Available | Positive | 2001291 - 2002595 | 47135.5 |
| tfp pilus assembly protein pilf | SAMN06295900_10484 | Not Available | Negative | 2002603 - 2004528 | 69014.6 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN06295900_10485 | Not Available | Positive | 2004736 - 2006466 | 62423.4 |
| formate dehydrogenase delta subunit | SAMN06295900_10486 | Not Available | Negative | 2006531 - 2006773 | 9071.85 |
| formate dehydrogenase alpha subunit | SAMN06295900_10487 | Not Available | Negative | 2006816 - 2009764 | 106965.0 |
| formate dehydrogenase beta subunit | SAMN06295900_10488 | Not Available | Negative | 2009783 - 2011372 | 55265.4 |
| formate dehydrogenase gamma subunit | SAMN06295900_10489 | Not Available | Negative | 2011369 - 2011887 | 18713.3 |
| transcriptional regulator of molybdate metabolism, lysr family | SAMN06295900_10490 | Not Available | Positive | 2012019 - 2013116 | 39438.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.