Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | SAMN06295900_10451 | Not Available | Positive | 1970589 - 1971248 | 23808.3 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN06295900_10452 | Not Available | Positive | 1971245 - 1971652 | 14322.9 |
| protease-4 | SAMN06295900_10453 | Not Available | Positive | 1971700 - 1972686 | 35172.8 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN06295900_10454 | Not Available | Negative | 1972768 - 1973490 | 25674.4 |
| septum formation protein | SAMN06295900_10455 | Not Available | Negative | 1973487 - 1974134 | 22863.3 |
| uncharacterized protein | SAMN06295900_10456 | Not Available | Positive | 1974491 - 1975165 | 23746.3 |
| lsu ribosomal protein l32p | SAMN06295900_10457 | Not Available | Positive | 1975310 - 1975489 | 6635.93 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN06295900_10458 | Not Available | Positive | 1975730 - 1976833 | 39199.6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN06295900_10459 | Not Available | Positive | 1976833 - 1977822 | 34817.4 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN06295900_10460 | Not Available | Positive | 1977919 - 1978857 | 32081.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.