Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, uit6 family | SAMN06295900_10441 | Not Available | Positive | 1957382 - 1958824 | 51263.9 |
| glyoxylate reductase | SAMN06295900_10442 | Not Available | Positive | 1958886 - 1959875 | 35150.2 |
| dna recombination protein rmuc | SAMN06295900_10443 | Not Available | Positive | 1959872 - 1961365 | 55036.6 |
| l-amino acid n-acyltransferase ynca | SAMN06295900_10444 | Not Available | Negative | 1961404 - 1961886 | 17920.6 |
| hypothetical protein | SAMN06295900_10445 | Not Available | Negative | 1961886 - 1962161 | 9868.46 |
| molybdopterin molybdochelatase | SAMN06295900_10446 | Not Available | Negative | 1962258 - 1963550 | 45627.7 |
| molybdenum cofactor guanylyltransferase | SAMN06295900_10447 | Not Available | Negative | 1963662 - 1964279 | 21874.3 |
| cyclic pyranopterin monophosphate synthase subunit moaa | SAMN06295900_10448 | Not Available | Negative | 1964295 - 1965401 | 39875.2 |
| rnase e | SAMN06295900_10449 | Not Available | Negative | 1965653 - 1968853 | 116726.0 |
| ribosomal large subunit pseudouridine synthase c | SAMN06295900_10450 | Not Available | Positive | 1969637 - 1970608 | 35787.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.