Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma54 specific transcriptional regulator, fis family | SAMN06295900_10421 | Not Available | Positive | 1936470 - 1937840 | 50632.1 |
| thymidylate synthase | SAMN06295900_10422 | Not Available | Positive | 1937984 - 1938955 | 36746.0 |
| fecr family protein | SAMN06295900_10423 | Not Available | Negative | 1939035 - 1941539 | 88931.0 |
| transcriptional regulator, arsr family | SAMN06295900_10424 | Not Available | Negative | 1941676 - 1942395 | 26042.2 |
| hypothetical protein | SAMN06295900_10425 | Not Available | Positive | 1942484 - 1942732 | 8778.63 |
| acyl-coa hydrolase | SAMN06295900_10426 | Not Available | Positive | 1942847 - 1943350 | 18149.1 |
| fumarase, class ii | SAMN06295900_10427 | Not Available | Negative | 1943420 - 1944814 | 49519.3 |
| putative cardiolipin synthase | SAMN06295900_10428 | Not Available | Negative | 1944886 - 1946535 | 60018.7 |
| multidrug resistance protein, mate family | SAMN06295900_10429 | Not Available | Negative | 1946851 - 1948230 | 47520.2 |
| ribosome-associated protein | SAMN06295900_10430 | Not Available | Negative | 1948487 - 1948708 | 7688.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.