Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ste24 endopeptidase | SAMN06295900_10411 | Not Available | Negative | 1924387 - 1925646 | 46429.0 |
| oligoribonuclease | SAMN06295900_10412 | Not Available | Positive | 1925806 - 1926414 | 23008.6 |
| molybdopterin adenylyltransferase | SAMN06295900_10413 | Not Available | Negative | 1926437 - 1927060 | 22113.7 |
| ribosome-associated protein | SAMN06295900_10414 | Not Available | Negative | 1927041 - 1927685 | 24003.4 |
| microcin-processing peptidase 1. unknown type peptidase. merops family u62 | SAMN06295900_10415 | Not Available | Positive | 1927860 - 1929242 | 49465.2 |
| uncharacterized iron-regulated membrane protein | SAMN06295900_10416 | Not Available | Negative | 1929291 - 1930505 | 43654.9 |
| iron complex outermembrane recepter protein | SAMN06295900_10417 | Not Available | Positive | 1930805 - 1932976 | 78786.0 |
| dihydrofolate reductase | SAMN06295900_10418 | Not Available | Negative | 1932998 - 1933498 | 18195.7 |
| sigma54 specific transcriptional regulator, fis family | SAMN06295900_10419 | Not Available | Negative | 1933611 - 1935104 | 54528.9 |
| hypothetical protein | SAMN06295900_10420 | Not Available | Negative | 1935383 - 1935991 | 23528.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.