Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein i (gspi) | SAMN06295900_103476 | Not Available | Positive | 1892079 - 1892492 | 14856.9 |
| general secretion pathway protein j | SAMN06295900_103477 | Not Available | Positive | 1892476 - 1893177 | 25244.0 |
| tetratricopeptide (tpr) repeat | SAMN06295900_103478 | Not Available | Positive | 1893330 - 1895561 | 81457.1 |
| tetratricopeptide (tpr) repeat | SAMN06295900_103479 | Not Available | Positive | 1895558 - 1897759 | 81425.0 |
| tetratricopeptide repeat-containing protein | SAMN06295900_103480 | Not Available | Positive | 1897756 - 1898517 | 27785.4 |
| filamentous hemagglutinin family n-terminal domain-containing protein | SAMN06295900_103481 | Not Available | Positive | 1898784 - 1911056 | 407644.0 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN06295900_103482 | Not Available | Negative | 1911176 - 1912468 | 43852.0 |
| hypothetical protein | SAMN06295900_103483 | Not Available | Negative | 1912645 - 1913439 | 30245.4 |
| general secretion pathway protein d | SAMN06295900_103484 | Not Available | Positive | 1913899 - 1916190 | 79580.2 |
| type ii secretion system (t2ss), protein e, n-terminal domain | SAMN06295900_103485 | Not Available | Positive | 1916187 - 1916656 | 16689.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.