Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_103436 | Not Available | Negative | 1846371 - 1847201 | 29655.9 |
| hypothetical protein | SAMN06295900_103437 | Not Available | Negative | 1847702 - 1847902 | 7184.61 |
| uncharacterized protein involved in response to no | SAMN06295900_103438 | Not Available | Positive | 1848249 - 1849451 | 43176.4 |
| uncharacterized conserved protein, contains tandem act domains | SAMN06295900_103439 | Not Available | Positive | 1849540 - 1849974 | 15948.9 |
| alcohol dehydrogenase, propanol-preferring | SAMN06295900_103440 | Not Available | Negative | 1850001 - 1851026 | 35918.3 |
| ribosomal subunit interface protein | SAMN06295900_103441 | Not Available | Negative | 1851171 - 1851494 | 12061.6 |
| diguanylate cyclase/phosphodiesterase with pas/pac sensor(s) | SAMN06295900_103442 | Not Available | Positive | 1851773 - 1854352 | 93727.4 |
| methyl-accepting chemotaxis sensory transducer with pas/pac sensor | SAMN06295900_103443 | Not Available | Positive | 1854355 - 1855983 | 58071.2 |
| rna polymerase sigma factor, sigma-70 family | SAMN06295900_103444 | Not Available | Negative | 1856029 - 1857249 | 44519.9 |
| hypothetical protein | SAMN06295900_103445 | Not Available | Positive | 1857734 - 1858378 | 23374.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.