Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large conductance mechanosensitive channel | SAMN06295900_103416 | Not Available | Negative | 1821245 - 1821706 | 16700.7 |
| methyl-accepting chemotaxis sensory transducer | SAMN06295900_103417 | Not Available | Negative | 1821832 - 1823238 | 50204.3 |
| methyl-accepting chemotaxis sensory transducer with tarh sensor | SAMN06295900_103418 | Not Available | Positive | 1823626 - 1825266 | 57591.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_103419 | Not Available | Negative | 1825308 - 1826270 | 35063.9 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN06295900_103420 | Not Available | Negative | 1826388 - 1827890 | 56027.4 |
| tetratricopeptide repeat-containing protein | SAMN06295900_103421 | Not Available | Negative | 1828049 - 1829275 | 43114.4 |
| phage shock protein a (pspa) family protein | SAMN06295900_103422 | Not Available | Negative | 1829350 - 1830030 | 24360.4 |
| hypothetical protein | SAMN06295900_103423 | Not Available | Negative | 1830340 - 1830909 | 19737.6 |
| penicillin-binding protein 1a | SAMN06295900_103424 | Not Available | Positive | 1831296 - 1833770 | 89394.7 |
| threonine dehydratase | SAMN06295900_103425 | Not Available | Negative | 1833825 - 1834883 | 37617.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.