Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN06295900_103406 | Not Available | Negative | 1809166 - 1810110 | 35768.2 |
| nucleoside abc transporter atp-binding protein | SAMN06295900_103407 | Not Available | Positive | 1810337 - 1811926 | 56463.1 |
| nucleoside abc transporter membrane protein | SAMN06295900_103408 | Not Available | Positive | 1812015 - 1813118 | 39425.0 |
| nucleoside abc transporter membrane protein | SAMN06295900_103409 | Not Available | Positive | 1813186 - 1814115 | 31890.6 |
| nucleoside-binding protein | SAMN06295900_103410 | Not Available | Positive | 1814179 - 1815267 | 38829.0 |
| hypothetical protein | SAMN06295900_103411 | Not Available | Negative | 1815420 - 1815629 | 7920.35 |
| 2-hydroxy-3-oxopropionate reductase | SAMN06295900_103412 | Not Available | Positive | 1815772 - 1816662 | 30165.5 |
| hypothetical protein | SAMN06295900_103413 | Not Available | Negative | 1816742 - 1817224 | 17960.7 |
| chase3 domain-containing protein | SAMN06295900_103414 | Not Available | Positive | 1817617 - 1819227 | 58989.6 |
| pas/pac sensor hybrid histidine kinase | SAMN06295900_103415 | Not Available | Positive | 1819273 - 1821264 | 72560.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.