Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein tetrapeptidase ld-carboxypeptidase serine peptidase. merops family s66 | SAMN06295900_103396 | Not Available | Positive | 1800622 - 1801557 | 33759.8 |
| putative urate catabolism protein | SAMN06295900_103397 | Not Available | Positive | 1801790 - 1802740 | 36399.2 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | SAMN06295900_103398 | Not Available | Positive | 1802737 - 1803258 | 18966.7 |
| allantoicase | SAMN06295900_103399 | Not Available | Positive | 1803355 - 1804368 | 36649.3 |
| ureidoglycolate lyase | SAMN06295900_103400 | Not Available | Positive | 1804381 - 1804899 | 18882.7 |
| hypothetical protein | SAMN06295900_103401 | Not Available | Positive | 1805173 - 1805313 | 4803.94 |
| flagellar transcriptional activator flhd | SAMN06295900_103402 | Not Available | Positive | 1805444 - 1805737 | 10275.4 |
| uncharacterized membrane protein | SAMN06295900_103403 | Not Available | Negative | 1805805 - 1807001 | 43673.6 |
| 5-hydroxyisourate hydrolase | SAMN06295900_103404 | Not Available | Negative | 1807042 - 1807395 | 12684.1 |
| cytosine/adenosine deaminase | SAMN06295900_103405 | Not Available | Positive | 1807680 - 1809074 | 49662.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.