Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted flavin-nucleotide-binding protein, pyridoxine 5'-phosphate oxidase superfamily | SAMN06295900_103376 | Not Available | Positive | 1782847 - 1783854 | 35723.2 |
| transcriptional regulator, gntr family | SAMN06295900_103377 | Not Available | Negative | 1783910 - 1784569 | 24273.4 |
| hypothetical protein | SAMN06295900_103378 | Not Available | Positive | 1784898 - 1787132 | 77946.5 |
| putative oxidoreductase | SAMN06295900_103379 | Not Available | Negative | 1787154 - 1787660 | 18239.5 |
| putative dna-binding domain-containing protein | SAMN06295900_103380 | Not Available | Negative | 1787666 - 1788451 | 27887.3 |
| hypothetical protein | SAMN06295900_103381 | Not Available | Negative | 1788448 - 1789374 | 33787.0 |
| uncharacterized membrane protein | SAMN06295900_103382 | Not Available | Negative | 1789408 - 1789719 | 10060.8 |
| multimeric flavodoxin wrba | SAMN06295900_103383 | Not Available | Negative | 1790112 - 1790666 | 19844.3 |
| transcriptional regulator, hxlr family | SAMN06295900_103384 | Not Available | Positive | 1790783 - 1791199 | 15656.7 |
| predicted alpha/beta hydrolase | SAMN06295900_103385 | Not Available | Negative | 1791247 - 1792131 | 32601.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.