Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [ssu ribosomal protein s18p]-alanine acetyltransferase | SAMN06295900_103296 | Not Available | Positive | 1690536 - 1691030 | 18511.5 |
| dna polymerase | SAMN06295900_103297 | Not Available | Positive | 1691017 - 1692030 | 35941.7 |
| hypothetical protein | SAMN06295900_103298 | Not Available | Positive | 1692027 - 1693043 | 37174.4 |
| hydroxymethylpyrimidine kinase /phosphomethylpyrimidine kinase | SAMN06295900_103299 | Not Available | Negative | 1693022 - 1693828 | 27609.4 |
| major facilitator superfamily protein | SAMN06295900_103300 | Not Available | Negative | 1693857 - 1695164 | 46697.9 |
| alanine racemase | SAMN06295900_103301 | Not Available | Positive | 1695388 - 1696458 | 38065.1 |
| dna replication and repair protein rada | SAMN06295900_103302 | Not Available | Positive | 1696483 - 1697901 | 49822.3 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN06295900_103303 | Not Available | Negative | 1697944 - 1699026 | 38652.5 |
| atp-binding cassette, subfamily f, member 3 | SAMN06295900_103304 | Not Available | Negative | 1699277 - 1701226 | 71152.8 |
| glutathione peroxidase | SAMN06295900_103305 | Not Available | Positive | 1701357 - 1701836 | 17659.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.