Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN06295900_103286 | Not Available | Negative | 1679877 - 1680755 | 32502.1 |
| uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like family | SAMN06295900_103287 | Not Available | Positive | 1681060 - 1681491 | 15564.5 |
| malate synthase | SAMN06295900_103288 | Not Available | Negative | 1681547 - 1683139 | 59024.7 |
| 2-haloacid dehalogenase | SAMN06295900_103289 | Not Available | Negative | 1683192 - 1683983 | 28421.8 |
| transcriptional regulator, lysr family | SAMN06295900_103290 | Not Available | Positive | 1684138 - 1685040 | 32511.1 |
| nucleotide-binding universal stress protein, uspa family | SAMN06295900_103291 | Not Available | Positive | 1685198 - 1685632 | 15593.6 |
| isocitrate lyase | SAMN06295900_103292 | Not Available | Negative | 1685727 - 1687034 | 47821.5 |
| superfamily ii dna and rna helicase | SAMN06295900_103293 | Not Available | Negative | 1687389 - 1688945 | 55035.6 |
| acyl-coa-binding protein | SAMN06295900_103294 | Not Available | Negative | 1689342 - 1689611 | 9798.51 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN06295900_103295 | Not Available | Positive | 1689784 - 1690539 | 25837.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.