Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_103276 | Not Available | Positive | 1672687 - 1672926 | 8589.34 |
| formyl-coa transferase | SAMN06295900_103277 | Not Available | Positive | 1673092 - 1674339 | 45610.6 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN06295900_103278 | Not Available | Positive | 1674484 - 1675263 | 28266.6 |
| nad(p) transhydrogenase subunit alpha | SAMN06295900_103279 | Not Available | Positive | 1675265 - 1676851 | 54467.5 |
| nad(p) transhydrogenase subunit beta | SAMN06295900_103280 | Not Available | Positive | 1676865 - 1678259 | 47501.7 |
| Trna-glu | Not Available | Not Available | Positive | 1678626 - 1678701 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1678781 - 1678857 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1678920 - 1678995 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1679071 - 1679147 | Not Available |
| acetyltransferase (gnat) family protein | SAMN06295900_103285 | Not Available | Positive | 1679358 - 1679825 | 17991.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.