Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna synthetase | SAMN06295900_103256 | Not Available | Positive | 1648771 - 1650180 | 51958.4 |
| Trna-ala | Not Available | Not Available | Positive | 1650299 - 1650374 | Not Available |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN06295900_103258 | Not Available | Negative | 1650530 - 1653736 | 117955.0 |
| abc-2 type transport system permease protein | SAMN06295900_103259 | Not Available | Negative | 1653913 - 1655037 | 40980.6 |
| ribosome-dependent atpase | SAMN06295900_103260 | Not Available | Negative | 1655040 - 1657832 | 101057.0 |
| hlyd family secretion protein | SAMN06295900_103261 | Not Available | Negative | 1657796 - 1658869 | 37888.4 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295900_103262 | Not Available | Negative | 1658866 - 1660401 | 55161.4 |
| cbs domain-containing membrane protein | SAMN06295900_103263 | Not Available | Positive | 1660670 - 1661587 | 31486.6 |
| hypothetical protein | SAMN06295900_103264 | Not Available | Negative | 1661684 - 1661815 | 4709.61 |
| ketopantoate reductase | SAMN06295900_103265 | Not Available | Positive | 1661840 - 1662874 | 36972.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.