Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_103246 | Not Available | Positive | 1638353 - 1638679 | 11645.9 |
| enoyl-[acyl-carrier-protein] reductase | SAMN06295900_103247 | Not Available | Negative | 1638829 - 1639623 | 28056.7 |
| hypothetical protein | SAMN06295900_103248 | Not Available | Positive | 1639988 - 1640683 | 26409.9 |
| microcin c transport system substrate-binding protein | SAMN06295900_103249 | Not Available | Positive | 1640771 - 1642654 | 69836.0 |
| microcin c transport system permease protein | SAMN06295900_103250 | Not Available | Positive | 1642703 - 1643749 | 38377.7 |
| microcin c transport system permease protein | SAMN06295900_103251 | Not Available | Positive | 1643749 - 1644861 | 41177.0 |
| microcin c transport system atp-binding protein | SAMN06295900_103252 | Not Available | Positive | 1644858 - 1646516 | 59781.7 |
| cell wall-associated hydrolase, nlpc family | SAMN06295900_103253 | Not Available | Positive | 1646627 - 1647316 | 24701.2 |
| nte family protein | SAMN06295900_103254 | Not Available | Negative | 1647499 - 1648434 | 32444.3 |
| hypothetical protein | SAMN06295900_103255 | Not Available | Positive | 1648474 - 1648581 | 3695.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.