Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| di-and tricarboxylate transporter | SAMN06295900_103226 | Not Available | Positive | 1621060 - 1622442 | 48863.7 |
| hypothetical protein | SAMN06295900_103227 | Not Available | Positive | 1622466 - 1622801 | 11528.7 |
| hypothetical protein | SAMN06295900_103228 | Not Available | Positive | 1622993 - 1623379 | 13779.1 |
| hypothetical protein | SAMN06295900_103229 | Not Available | Positive | 1623366 - 1623707 | 11975.2 |
| chorismate mutase | SAMN06295900_103230 | Not Available | Negative | 1623787 - 1624362 | 20733.9 |
| uncharacterized membrane protein | SAMN06295900_103231 | Not Available | Negative | 1624720 - 1625148 | 15210.2 |
| integral membrane protein | SAMN06295900_103232 | Not Available | Negative | 1625118 - 1625426 | 11126.9 |
| transcriptional regulator, arac family with amidase-like domain | SAMN06295900_103233 | Not Available | Positive | 1625533 - 1626516 | 35245.3 |
| ribose 1,5-bisphosphokinase | SAMN06295900_103234 | Not Available | Negative | 1626605 - 1627153 | 20165.3 |
| predicted arabinose efflux permease, mfs family | SAMN06295900_103235 | Not Available | Positive | 1627445 - 1628788 | 47584.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.