Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketopantoate reductase | SAMN06295900_103206 | Not Available | Negative | 1601983 - 1602870 | 31320.6 |
| hypothetical protein | SAMN06295900_103207 | Not Available | Negative | 1602981 - 1603445 | 17139.2 |
| arginine exporter protein argo | SAMN06295900_103208 | Not Available | Negative | 1603464 - 1604096 | 22043.5 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN06295900_103209 | Not Available | Positive | 1604190 - 1604654 | 16568.1 |
| hypothetical protein | SAMN06295900_103210 | Not Available | Positive | 1605022 - 1605510 | 17476.9 |
| transcriptional regulator, lysr family | SAMN06295900_103211 | Not Available | Negative | 1605734 - 1606666 | 34031.0 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN06295900_103212 | Not Available | Positive | 1606954 - 1607298 | 11839.3 |
| anti-ecfsigma factor, chrr | SAMN06295900_103213 | Not Available | Positive | 1607359 - 1608051 | 25801.8 |
| monoamine oxidase | SAMN06295900_103214 | Not Available | Positive | 1608054 - 1609205 | 41519.6 |
| alcohol dehydrogenase | SAMN06295900_103215 | Not Available | Positive | 1609277 - 1610305 | 35790.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.