Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN06295900_103196 | Not Available | Negative | 1591531 - 1592445 | 32887.8 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN06295900_103197 | Not Available | Negative | 1592451 - 1593191 | 27392.9 |
| glyoxylate/hydroxypyruvate reductase a | SAMN06295900_103198 | Not Available | Negative | 1593199 - 1594143 | 33983.8 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN06295900_103199 | Not Available | Negative | 1594140 - 1594694 | 20857.7 |
| histidinol-phosphate aminotransferase | SAMN06295900_103200 | Not Available | Negative | 1594708 - 1595826 | 39141.1 |
| hypothetical protein | SAMN06295900_103201 | Not Available | Negative | 1595838 - 1596380 | 20425.3 |
| iron-containing redox enzyme | SAMN06295900_103202 | Not Available | Negative | 1596420 - 1597397 | 36806.7 |
| imidazolonepropionase | SAMN06295900_103203 | Not Available | Negative | 1597753 - 1598997 | 43200.9 |
| mfs transporter, mhs family, proline/betaine transporter | SAMN06295900_103204 | Not Available | Negative | 1598988 - 1600313 | 46632.9 |
| transcriptional regulator, lysr family | SAMN06295900_103205 | Not Available | Negative | 1600499 - 1601416 | 34838.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.