Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 1580163 - 1580256 | Not Available |
| dna-binding transcriptional regulator, lysr family | SAMN06295900_103187 | Not Available | Negative | 1580427 - 1581338 | 33580.9 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN06295900_103188 | Not Available | Positive | 1581479 - 1582348 | 29969.4 |
| acyl-coa reductase | SAMN06295900_103189 | Not Available | Positive | 1582378 - 1583889 | 53060.3 |
| protein of unknown function | SAMN06295900_103190 | Not Available | Positive | 1584022 - 1585368 | 46889.2 |
| acetoin utilization deacetylase acuc | SAMN06295900_103191 | Not Available | Negative | 1585442 - 1586470 | 37305.4 |
| peptide/nickel transport system atp-binding protein | SAMN06295900_103192 | Not Available | Negative | 1586467 - 1588095 | 58037.7 |
| peptide/nickel transport system permease protein | SAMN06295900_103193 | Not Available | Negative | 1588092 - 1588937 | 29851.2 |
| peptide/nickel transport system permease protein | SAMN06295900_103194 | Not Available | Negative | 1588949 - 1589929 | 35325.9 |
| peptide/nickel transport system substrate-binding protein | SAMN06295900_103195 | Not Available | Negative | 1589937 - 1591490 | 57775.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.