Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine o-acetyltransferase | SAMN06295900_103176 | Not Available | Positive | 1569698 - 1570465 | 27157.9 |
| udp-2,3-diacylglucosamine hydrolase | SAMN06295900_103177 | Not Available | Negative | 1570492 - 1571334 | 31717.9 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN06295900_103178 | Not Available | Negative | 1571331 - 1571825 | 18122.4 |
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a) | SAMN06295900_103179 | Not Available | Negative | 1571898 - 1572482 | 20653.6 |
| tetratricopeptide repeat-containing protein | SAMN06295900_103180 | Not Available | Negative | 1572520 - 1573215 | 24316.0 |
| cysteinyl-trna synthetase | SAMN06295900_103181 | Not Available | Positive | 1573460 - 1574854 | 51942.5 |
| dna-3-methyladenine glycosylase ii | SAMN06295900_103182 | Not Available | Positive | 1574902 - 1575885 | 35192.2 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN06295900_103183 | Not Available | Positive | 1575980 - 1576951 | 35727.9 |
| trna(ile)-lysidine synthase | SAMN06295900_103184 | Not Available | Positive | 1577055 - 1578479 | 52193.4 |
| aspartate kinase | SAMN06295900_103185 | Not Available | Positive | 1578745 - 1579995 | 45137.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.