Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN06295900_103166 | Not Available | Negative | 1559796 - 1560419 | 22820.5 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN06295900_103167 | Not Available | Positive | 1560553 - 1561038 | 18202.7 |
| phenazine biosynthesis protein phzf family | SAMN06295900_103168 | Not Available | Negative | 1561374 - 1562174 | 29067.7 |
| predicted oxidoreductase | SAMN06295900_103169 | Not Available | Negative | 1562377 - 1563252 | 31047.2 |
| transcriptional regulator, lysr family | SAMN06295900_103170 | Not Available | Positive | 1563352 - 1564287 | 33800.1 |
| cytochrome c, mono-and diheme variants | SAMN06295900_103171 | Not Available | Positive | 1564365 - 1565204 | 29998.0 |
| methyltransferase domain-containing protein | SAMN06295900_103172 | Not Available | Negative | 1565272 - 1565895 | 22288.8 |
| major facilitator superfamily protein | SAMN06295900_103173 | Not Available | Negative | 1565920 - 1567218 | 45751.1 |
| myo-inositol-1(or 4)-monophosphatase | SAMN06295900_103174 | Not Available | Negative | 1567311 - 1568111 | 29097.7 |
| trna/rrna methyltransferase | SAMN06295900_103175 | Not Available | Positive | 1568702 - 1569463 | 26866.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.