Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretion | SAMN06295900_103156 | Not Available | Positive | 1546470 - 1546760 | 10584.5 |
| hypothetical protein | SAMN06295900_103157 | Not Available | Positive | 1546822 - 1548066 | 45226.1 |
| type vi secretion system protein impl | SAMN06295900_103158 | Not Available | Positive | 1548063 - 1551605 | 127978.0 |
| type vi secretion system protein impg | SAMN06295900_103159 | Not Available | Positive | 1551602 - 1553413 | 67855.1 |
| type vi secretion system protein vasd | SAMN06295900_103160 | Not Available | Positive | 1553410 - 1553943 | 19263.2 |
| hypothetical protein | SAMN06295900_103161 | Not Available | Positive | 1554078 - 1555160 | 39851.5 |
| hypothetical protein | SAMN06295900_103162 | Not Available | Positive | 1555475 - 1555888 | 14656.6 |
| hypothetical protein | SAMN06295900_103163 | Not Available | Negative | 1556178 - 1558070 | 68337.1 |
| transcriptional regulator, arac family /transcriptional regulator, arac family with amidase-like domain | SAMN06295900_103164 | Not Available | Negative | 1558263 - 1559270 | 37351.4 |
| rhodanese-related sulfurtransferase | SAMN06295900_103165 | Not Available | Positive | 1559396 - 1559818 | 14505.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.