Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein hsca | SAMN06295900_103116 | Not Available | Positive | 1498945 - 1500810 | 65554.6 |
| ferredoxin, 2fe-2s | SAMN06295900_103117 | Not Available | Positive | 1500963 - 1501304 | 12365.7 |
| fes assembly protein iscx | SAMN06295900_103118 | Not Available | Positive | 1501321 - 1501518 | 7690.83 |
| cdp-paratose 2-epimerase | SAMN06295900_103119 | Not Available | Negative | 1501682 - 1502704 | 37626.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN06295900_103120 | Not Available | Negative | 1502701 - 1503588 | 33032.5 |
| hypothetical protein | SAMN06295900_103121 | Not Available | Negative | 1503599 - 1504912 | 49638.3 |
| outer membrane lipoprotein slyb | SAMN06295900_103122 | Not Available | Negative | 1505274 - 1506053 | 26364.7 |
| lysyl-trna synthetase, class ii | SAMN06295900_103123 | Not Available | Negative | 1506321 - 1507922 | 60332.1 |
| bacterial peptide chain release factor 2 (brf-2) | SAMN06295900_103124 | Not Available | Negative | 1507956 - 1509023 | 39484.1 |
| exonuclease recj | SAMN06295900_103125 | Not Available | Negative | 1509155 - 1510867 | 61016.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.