Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase complex protein llde | SAMN06295900_103106 | Not Available | Positive | 1492139 - 1492861 | 26023.7 |
| iron-sulfur cluster-binding protein | SAMN06295900_103107 | Not Available | Positive | 1492875 - 1494287 | 51847.2 |
| hypothetical protein | SAMN06295900_103108 | Not Available | Positive | 1494452 - 1494691 | 8245.0 |
| protein tyrosine phosphatase | SAMN06295900_103109 | Not Available | Positive | 1494772 - 1495263 | 17604.2 |
| hypothetical protein | SAMN06295900_103110 | Not Available | Positive | 1495260 - 1495394 | 4928.33 |
| transcriptional regulator, badm/rrf2 family | SAMN06295900_103111 | Not Available | Positive | 1495452 - 1495982 | 19213.8 |
| cysteine desulfurase iscs | SAMN06295900_103112 | Not Available | Positive | 1496066 - 1497289 | 45656.8 |
| fes assembly scaffold apoprotein iscu /modular fes cluster scaffolding protein nifu | SAMN06295900_103113 | Not Available | Positive | 1497408 - 1497830 | 14722.3 |
| iron-binding apoprotein isca | SAMN06295900_103114 | Not Available | Positive | 1497838 - 1498161 | 11861.1 |
| co-chaperone protein hscb | SAMN06295900_103115 | Not Available | Positive | 1498266 - 1498793 | 19550.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.