Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | SAMN06295900_10356 | Not Available | Positive | 1431192 - 1431812 | 22827.6 |
| hypothetical protein | SAMN06295900_10357 | Not Available | Positive | 1431953 - 1432156 | 7246.04 |
| hypothetical protein | SAMN06295900_10358 | Not Available | Positive | 1432170 - 1432643 | 16422.8 |
| fe-s cluster biosynthesis and repair protein yggx | SAMN06295900_10359 | Not Available | Negative | 1432732 - 1433010 | 10545.7 |
| n-acetylglutamate synthase | SAMN06295900_10360 | Not Available | Negative | 1433057 - 1434436 | 50549.9 |
| atp-dependent helicase hrpa | SAMN06295900_10361 | Not Available | Positive | 1434459 - 1438547 | 151602.0 |
| dna-binding beta-propeller fold protein ynce | SAMN06295900_10362 | Not Available | Positive | 1438642 - 1439667 | 37021.6 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN06295900_10363 | Not Available | Positive | 1439697 - 1440701 | 38462.2 |
| etoposide-induced protein 2.4 (ei24) | SAMN06295900_10364 | Not Available | Positive | 1440717 - 1441583 | 31380.2 |
| predicted small secreted protein | SAMN06295900_10365 | Not Available | Negative | 1441610 - 1441747 | 4606.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.