Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-4 component f | SAMN06295900_10316 | Not Available | Positive | 1383670 - 1385130 | 51530.6 |
| ni,fe-hydrogenase iii large subunit | SAMN06295900_10317 | Not Available | Positive | 1385134 - 1386705 | 57423.4 |
| ni,fe-hydrogenase iii small subunit | SAMN06295900_10318 | Not Available | Positive | 1386705 - 1387244 | 19220.2 |
| transcriptional regulator of acetoin/glycerol metabolism | SAMN06295900_10319 | Not Available | Positive | 1387458 - 1389443 | 72755.0 |
| predicted polyphosphate-or atp-dependent nad kinase | SAMN06295900_10320 | Not Available | Positive | 1389675 - 1390766 | 38236.4 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN06295900_10321 | Not Available | Positive | 1390818 - 1391819 | 35473.3 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN06295900_10322 | Not Available | Positive | 1391867 - 1392883 | 36151.8 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN06295900_10323 | Not Available | Positive | 1392883 - 1394001 | 40076.0 |
| (r,r)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase | SAMN06295900_10324 | Not Available | Positive | 1394102 - 1395208 | 38833.8 |
| lipoate-protein ligase a | SAMN06295900_10325 | Not Available | Positive | 1395360 - 1396109 | 26127.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.