Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dolichol-phosphate mannosyltransferase | SAMN06295900_102498 | Not Available | Negative | 1362883 - 1363608 | 28060.0 |
| cdp-paratose 2-epimerase | SAMN06295900_102499 | Not Available | Negative | 1363605 - 1364633 | 38006.1 |
| nucleoside-diphosphate-sugar epimerase | SAMN06295900_102500 | Not Available | Negative | 1364630 - 1365511 | 32846.3 |
| transcriptional regulator, propionate catabolism operon regulatory protein | SAMN06295900_102501 | Not Available | Negative | 1365617 - 1367599 | 70623.2 |
| hypothetical protein | SAMN06295900_102502 | Not Available | Positive | 1367786 - 1368013 | 7559.99 |
| hypothetical protein | SAMN06295900_1031 | Not Available | Positive | 1368014 - 1368163 | 5492.73 |
| iron complex outermembrane recepter protein | SAMN06295900_1032 | Not Available | Negative | 1368362 - 1370305 | 70447.6 |
| protein of unknown function | SAMN06295900_1033 | Not Available | Negative | 1370642 - 1371028 | 13078.9 |
| putative solute:sodium symporter small subunit | SAMN06295900_1034 | Not Available | Positive | 1371146 - 1371622 | 17578.9 |
| cation/acetate symporter | SAMN06295900_1035 | Not Available | Positive | 1371619 - 1373637 | 73768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.