Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_102468 | Not Available | Positive | 1327822 - 1328184 | 13260.8 |
| prop effector | SAMN06295900_102469 | Not Available | Negative | 1328432 - 1329196 | 26212.6 |
| hypothetical protein | SAMN06295900_102470 | Not Available | Positive | 1329496 - 1330206 | 25999.0 |
| beta-glucosidase | SAMN06295900_102471 | Not Available | Negative | 1330248 - 1332725 | 88276.8 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN06295900_102472 | Not Available | Negative | 1332817 - 1333662 | 31090.6 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN06295900_102473 | Not Available | Negative | 1333664 - 1334581 | 33236.2 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN06295900_102474 | Not Available | Negative | 1334625 - 1335932 | 47216.4 |
| transcriptional regulator, laci family | SAMN06295900_102475 | Not Available | Positive | 1336356 - 1337438 | 38369.4 |
| two-component system, ompr family, phosphate regulon response regulator ompr | SAMN06295900_102476 | Not Available | Negative | 1337458 - 1338249 | 29638.1 |
| two-component system, ompr family, sensor histidine kinase baes | SAMN06295900_102477 | Not Available | Positive | 1338542 - 1340050 | 53984.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.