Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir chaperone protein (cest) family protein | SAMN06295900_102458 | Not Available | Positive | 1318185 - 1318640 | 17078.2 |
| hypothetical protein | SAMN06295900_102459 | Not Available | Negative | 1319090 - 1319722 | 21874.0 |
| hypothetical protein | SAMN06295900_102460 | Not Available | Negative | 1319719 - 1319904 | 6620.12 |
| hypothetical protein | SAMN06295900_102461 | Not Available | Negative | 1320179 - 1321117 | 32425.6 |
| dnaj domain-containing protein | SAMN06295900_102462 | Not Available | Negative | 1321389 - 1322837 | 50907.9 |
| hypothetical protein | SAMN06295900_102463 | Not Available | Negative | 1322967 - 1323665 | 25023.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06295900_102464 | Not Available | Negative | 1323665 - 1324252 | 22325.6 |
| hypothetical protein | SAMN06295900_102465 | Not Available | Negative | 1324384 - 1324959 | 20782.1 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN06295900_102466 | Not Available | Positive | 1325033 - 1326955 | 69359.0 |
| transglycosylase slt domain-containing protein | SAMN06295900_102467 | Not Available | Negative | 1326965 - 1327543 | 21589.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.