Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein u | SAMN06295900_102448 | Not Available | Positive | 1309765 - 1310904 | 40744.6 |
| type iii secretion protein v | SAMN06295900_102449 | Not Available | Positive | 1310901 - 1312952 | 72683.4 |
| type iii secretion protein (hpap) | SAMN06295900_102450 | Not Available | Positive | 1312973 - 1313713 | 26011.5 |
| type iii secretion protein q | SAMN06295900_102451 | Not Available | Positive | 1313742 - 1314815 | 37810.1 |
| type iii secretion protein r | SAMN06295900_102452 | Not Available | Positive | 1314799 - 1315446 | 23329.2 |
| type iii secretion protein s | SAMN06295900_102453 | Not Available | Positive | 1315454 - 1315714 | 8925.12 |
| hypothetical protein | SAMN06295900_102454 | Not Available | Positive | 1315711 - 1316454 | 26752.9 |
| type iii secretion protein d | SAMN06295900_102455 | Not Available | Positive | 1316505 - 1317524 | 36498.5 |
| hypothetical protein | SAMN06295900_102456 | Not Available | Positive | 1317572 - 1317820 | 8801.33 |
| hypothetical protein | SAMN06295900_102457 | Not Available | Positive | 1317917 - 1318129 | 7011.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.