Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine rich repeat-containing protein | SAMN06295900_102388 | Not Available | Negative | 1223425 - 1225437 | 72760.7 |
| leucine rich repeat-containing protein | SAMN06295900_102389 | Not Available | Negative | 1225461 - 1227962 | 91515.8 |
| leucine rich repeat-containing protein | SAMN06295900_102390 | Not Available | Negative | 1228153 - 1229928 | 64144.7 |
| hypothetical protein | SAMN06295900_102391 | Not Available | Positive | 1229996 - 1230214 | 7892.31 |
| pentatricopeptide repeat domain-containing protein (ppr motif) | SAMN06295900_102392 | Not Available | Positive | 1230284 - 1232860 | 91730.0 |
| hypothetical protein | SAMN06295900_102393 | Not Available | Positive | 1232948 - 1233187 | 8877.66 |
| sedolisin-b serine peptidase. merops family s53 | SAMN06295900_102394 | Not Available | Negative | 1233073 - 1235028 | 67094.6 |
| penicillin-binding protein 1a | SAMN06295900_102395 | Not Available | Positive | 1235597 - 1238137 | 91934.2 |
| lytic murein transglycosylase | SAMN06295900_102396 | Not Available | Positive | 1238566 - 1239870 | 47411.1 |
| parb-like nuclease domain-containing protein | SAMN06295900_102397 | Not Available | Negative | 1239884 - 1240300 | 15436.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.