Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_102348 | Not Available | Positive | 1175987 - 1178062 | 75906.2 |
| short chain dehydrogenase | SAMN06295900_102349 | Not Available | Positive | 1178151 - 1178897 | 27142.3 |
| rsbt co-antagonist protein rsbr | SAMN06295900_102350 | Not Available | Positive | 1179309 - 1180280 | 35177.1 |
| rsbt antagonist protein rsbs | SAMN06295900_102351 | Not Available | Positive | 1180240 - 1180659 | 14555.5 |
| serine/threonine-protein kinase rsbt | SAMN06295900_102352 | Not Available | Positive | 1180649 - 1181050 | 14796.8 |
| negative regulator of sigma-b (phosphoserine phosphatase) | SAMN06295900_102353 | Not Available | Positive | 1181047 - 1181667 | 21525.6 |
| two-component system, narl family, sensor histidine kinase uhpb | SAMN06295900_102354 | Not Available | Positive | 1181664 - 1183016 | 50486.4 |
| serine/threonine-protein kinase rsbt | SAMN06295900_102355 | Not Available | Negative | 1183018 - 1183446 | 14711.5 |
| protein of unknown function | SAMN06295900_102356 | Not Available | Positive | 1183643 - 1184410 | 27351.0 |
| protein of unknown function | SAMN06295900_102357 | Not Available | Positive | 1184421 - 1186517 | 74478.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.