Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_102318 | Not Available | Negative | 1149188 - 1149388 | 6976.11 |
| lysozyme | SAMN06295900_102319 | Not Available | Negative | 1149491 - 1149931 | 15572.6 |
| hypothetical protein | SAMN06295900_102320 | Not Available | Positive | 1150253 - 1150840 | 20972.9 |
| hypothetical protein | SAMN06295900_102321 | Not Available | Negative | 1150959 - 1151510 | 20137.3 |
| poly(3-hydroxybutyrate) depolymerase | SAMN06295900_102322 | Not Available | Negative | 1151522 - 1152595 | 37971.1 |
| hypothetical protein | SAMN06295900_102323 | Not Available | Negative | 1152625 - 1153029 | 14230.8 |
| protein of unknown function | SAMN06295900_102324 | Not Available | Negative | 1153113 - 1153907 | 28951.3 |
| hypothetical protein | SAMN06295900_102325 | Not Available | Negative | 1153950 - 1154639 | 22113.7 |
| killing trait domain-containing protein | SAMN06295900_102326 | Not Available | Negative | 1154665 - 1154901 | 8048.58 |
| rna polymerase, sigma-24 subunit, rpoe | SAMN06295900_102327 | Not Available | Negative | 1155005 - 1155559 | 21427.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.