Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06295900_102308 | Not Available | Positive | 1141270 - 1141767 | 18237.3 |
| transcriptional regulator, laci family | SAMN06295900_102309 | Not Available | Negative | 1141819 - 1142913 | 38888.5 |
| sugar phosphate permease | SAMN06295900_102310 | Not Available | Positive | 1143273 - 1144601 | 46811.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN06295900_102311 | Not Available | Positive | 1144636 - 1145589 | 34868.9 |
| hypothetical protein | SAMN06295900_102312 | Not Available | Negative | 1145639 - 1145938 | 9688.97 |
| histidine kinase | SAMN06295900_102313 | Not Available | Positive | 1146178 - 1147305 | 41298.5 |
| killing trait domain-containing protein | SAMN06295900_102314 | Not Available | Negative | 1147447 - 1147773 | 11400.5 |
| killing trait domain-containing protein | SAMN06295900_102315 | Not Available | Negative | 1147819 - 1148145 | 11387.3 |
| killing trait domain-containing protein | SAMN06295900_102316 | Not Available | Negative | 1148175 - 1148498 | 11309.5 |
| hypothetical protein | SAMN06295900_102317 | Not Available | Negative | 1148581 - 1149195 | 21649.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.