Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_102288 | Not Available | Positive | 1120361 - 1120603 | 8866.89 |
| aldehyde dehydrogenase (nad+) | SAMN06295900_102289 | Not Available | Positive | 1120821 - 1122302 | 52121.2 |
| 2-haloacid dehalogenase | SAMN06295900_102290 | Not Available | Positive | 1122516 - 1123184 | 25573.4 |
| glycine/d-amino acid oxidase | SAMN06295900_102291 | Not Available | Positive | 1123247 - 1124524 | 46191.2 |
| peptide/nickel transport system substrate-binding protein | SAMN06295900_102292 | Not Available | Positive | 1124576 - 1126192 | 57897.4 |
| peptide/nickel transport system permease protein | SAMN06295900_102293 | Not Available | Positive | 1126266 - 1127222 | 33596.3 |
| peptide/nickel transport system permease protein | SAMN06295900_102294 | Not Available | Positive | 1127219 - 1128175 | 33686.1 |
| peptide/nickel transport system atp-binding protein | SAMN06295900_102295 | Not Available | Positive | 1128180 - 1130033 | 65126.5 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN06295900_102296 | Not Available | Positive | 1130030 - 1130344 | 11368.6 |
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN06295900_102297 | Not Available | Positive | 1130329 - 1131702 | 47966.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.