Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN06295900_102278 | Not Available | Negative | 1108075 - 1109163 | 39955.8 |
| transcriptional regulator, lysr family | SAMN06295900_102279 | Not Available | Positive | 1109393 - 1110328 | 33975.6 |
| hypothetical protein | SAMN06295900_102280 | Not Available | Negative | 1110217 - 1110453 | 8698.21 |
| protein of unknown function | SAMN06295900_102281 | Not Available | Positive | 1110816 - 1112900 | 77187.4 |
| protein of unknown function | SAMN06295900_102282 | Not Available | Positive | 1112897 - 1114564 | 61363.8 |
| protein of unknown function | SAMN06295900_102283 | Not Available | Positive | 1114740 - 1116269 | 55545.6 |
| transcriptional regulator, asnc family | SAMN06295900_102284 | Not Available | Negative | 1116320 - 1116811 | 18551.5 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMN06295900_102285 | Not Available | Negative | 1116857 - 1118278 | 50403.2 |
| glyoxylate/hydroxypyruvate reductase a | SAMN06295900_102286 | Not Available | Negative | 1118422 - 1119348 | 34119.4 |
| predicted n-acetyltransferase yhbs | SAMN06295900_102287 | Not Available | Negative | 1119363 - 1120223 | 30853.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.